| 2018 | ICRA | Kinematic Design Optimization of a Parallel Surgical Robot to Maximize Anatomical Visibility via Motion Planning. | Alan Kuntz, Chris Bowen, Cenk Baykal, Arthur W. Mahoney, Patrick L. Anderson, Fabien Maldonado, Robert J. Webster III, Ron Alterovitz |
| 2017 | IROS | Motion planning for continuum reconfigurable incisionless surgical parallel robots. | Alan Kuntz, Arthur W. Mahoney, Nicolas E. Peckman, Patrick L. Anderson, Fabien Maldonado, Robert J. Webster III, Ron Alterovitz |
| 2016 | ICRA | On the inseparable nature of sensor selection, sensor placement, and state estimation for continuum robots or "where to put your sensors and how to use them". | Arthur W. Mahoney, Trevor L. Bruns, Philip J. Swaney, Robert J. Webster III |
| 2016 | IROS | Reconfigurable parallel continuum robots for incisionless surgery. | Arthur W. Mahoney, Patrick L. Anderson, Philip J. Swaney, Fabien Maldonado, Robert J. Webster III |
| 2015 | ICRA | Tendons, concentric tubes, and a bevel tip: Three steerable robots in one transoral lung access system. | Philip J. Swaney, Arthur W. Mahoney, Andria A. Remirez, Erik Lamers, Bryan I. Hartley, Richard H. Feins, Ron Alterovitz, Robert J. Webster III |
| 2015 | ICRA | A spherical-magnet end-effector for robotic magnetic manipulation. | Samuel E. Wright, Arthur W. Mahoney, Katie M. Popek, Jake J. Abbott |
| 2015 | ISRR | Design, Sensing, and Planning: Fundamentally Coupled Problems for Continuum Robots. | Arthur W. Mahoney, Trevor L. Bruns, Ron Alterovitz, Robert J. Webster III |
| 2013 | ICRA | Managing the attractive magnetic force between an untethered magnetically actuated tool and a rotating permanent magnet. | Arthur W. Mahoney, Samuel E. Wright, Jake J. Abbott |
| 2013 | ICRA | Localization method for a magnetic capsule endoscope propelled by a rotating magnetic dipole field. | Katie M. Popek, Arthur W. Mahoney, Jake J. Abbott |
| 2012 | ICRA | Control of untethered magnetically actuated tools using a rotating permanent magnet in any position. | Arthur W. Mahoney, Daniel L. Cowan, Katie M. Miller, Jake J. Abbott |
| 2012 | IROS | Non-ideal behaviors of magnetically driven screws in soft tissue. | Arthur W. Mahoney, Nathan D. Nelson, Erin M. Parsons, Jake J. Abbott |
| 2012 | IROS | Proprioceptive magnetic-field sensing for closed-loop control of magnetic capsule endoscopes. | Katie M. Miller, Arthur W. Mahoney, Thomas Schmid, Jake J. Abbott |
| 2009 | PDPTA | Scalable, Parallel, and Distributed Approximate Shortest Paths in Massive Graphs. | Arthur W. Mahoney, Greg Newby, Daniel W. Watson |
| 2008 | CIBCB | Discovering novel cancer therapies: A computational modeling and search approach. | Arthur W. Mahoney, Brian G. Smith, Nicholas S. Flann, Gregory J. Podgorski |
| 2006 | PDPTA | Path Planning for Altruistically Negotiating Systems: The Near-Sighted Tarzan Algorithm. | Arthur W. Mahoney, Daniel W. Watson |