| 2016 | DATE | A q-gram birthmarking approach to predicting reusable hardware. | Kevin Zeng, Peter M. Athanas |
| 2016 | FCCM | Finding Space-Time Stream Permutations for Minimum Memory and Latency. | Thaddeus Koehn, Peter M. Athanas |
| 2016 | ICCAD | Arbitrary streaming permutations with minimum memory and latency. | Thaddeus Koehn, Peter M. Athanas |
| 2015 | IRI | Discovering Reusable Hardware Using Birthmarking Techniques. | Kevin Zeng, Peter M. Athanas |
| 2010 | DSD | Physical Layer for Spectrum-Aware Reconfigurable OFDM on an FPGA. | Adolfo Recio, Peter M. Athanas |
| 2007 | AINA | Collaborative Synchronization for Signal Reinforcement in Sensor Networks. | Todd B. Fleming, Peter M. Athanas |
| 2007 | AINA | Collaborative Signal Reinforcement in Sensor Networks. | Tingting Meng, Peter M. Athanas |
| 2007 | FPL | Wires On Demand: Run-Time Communication Synthesis for Reconfigurable Computing. | Peter M. Athanas, John W. Bowen, Timothy Dunham, Cameron D. Patterson, J. Rice, Matthew Shelburne, Jorge Surs, Mark B. Bucciero, Jonathan Graf |
| 2005 | RSP | An 8-GHz Ultra Wideband Transceiver Prototyping Testbed. | Deepak Argarwal, Christopher Robert Anderson, Peter M. Athanas |
| 2004 | FCCM | An Alternate Wire Database for Xilinx FPGAs. | Neil Steiner, Peter M. Athanas |
| 2004 | FPL | A Key Management Architecture for Securing Off-Chip Data Transfers. | Jonathan Graf, Peter M. Athanas |
| 2004 | FPL | JHDLBits: The Merging of Two Worlds. | Alexandra Poetter, Jesse Hunter, Cameron D. Patterson, Peter M. Athanas, Brent E. Nelson, Neil Steiner |
| 2003 | RSP | A Versatile Framework for FPGA Field Updates: An Application of Partial Self-Reconfiguation. | Ryan J. Fong, Scott J. Harper, Peter M. Athanas |
| 2002 | FCCM | Reconfigurable Object Detection in FLIR Image Sequences. | Jonathan E. Scalera, Creed F. Jones III, Maneesh Soni, Mark B. Bucciero, Peter M. Athanas, A. Lynn Abbott, Amitabh Mishra |
| 1999 | FCCM | Implementation and Evaluation of a Prototype Reconfigurable Router. | Jason R. Hess, David C. Lee, Scott J. Harper, Mark T. Jones, Peter M. Athanas |
| 1998 | FCCM | A Run-Time Reconfigurable Engine for Image Interpolation. | Rhett Daniel Hudson, David I. Lehn, Peter M. Athanas |
| 1998 | FCCM | A Stream-Based Configurable Computing Radio Testbed. | Steven Swanchara, Scott J. Harper, Peter M. Athanas |
| 1997 | FCCM | Computing kernels implemented with a wormhole RTR CCM. | Ray Bittner, Peter M. Athanas |
| 1997 | FPGA | Wormhole Run-Time Reconfiguration. | Ray Bittner, Peter M. Athanas |
| 1997 | FPL | Stream synthesis for a wormhole run-time reconfigurable platform. | Brian Kahne, Peter M. Athanas |
| 1996 | FCCM | Using rapid prototyping to teach the design of complete computing solutions. | Peter M. Athanas, Rhett Daniel Hudson |
| 1996 | FCCM | Scheduling and partitioning ANSI-C programs onto multi-FPGA CCM architectures. | James B. Peterson, R. Brendan O'Connor, Peter M. Athanas |
| 1995 | FCCM | Quantitative analysis of floating point arithmetic on FPGA based custom computing machines. | Nabeel Shirazi, Al Walters, Peter M. Athanas |
| 1995 | FPL | High-Speed Region Detection and Labeling Using an FPGA Based Custom Computing Platform. | Ramana V. Rachakonda, Peter M. Athanas, A. Lynn Abbott |
| 1995 | FPL | Implementation of a 2-D Fast Fourier Transform on an FPGA-Based Custom Computing Machine. | Nabeel Shirazi, Peter M. Athanas, A. Lynn Abbott |
| 1994 | FPL | Image Processing on a Custom Computing Platform. | Peter M. Athanas, A. Lynn Abbott |
| 1992 | ICASSP | Distributed hidden Markov model training on loosely-coupled multiprocessor networks. | J. T. Foote, Michael M. Hochberg, Peter M. Athanas, Aaron Smith, Michael E. Wazlowski, Harvey F. Silverman |
| 1991 | ICCD | An Adaptive Hardware Machine Architecture and Compiler for Dynamic Processor Reconfiguration. | Peter M. Athanas, Harvey F. Silverman |