| 2010 | The Effect of Sequence Error and Partial Training Data on BLAST Accuracy. | Steven D. Essinger, Gail L. Rosen |
| 2010 | A Supervised Approach for Predicting Patient Survival with Gene Expression Data. | Karthik Devarajan, Yan Zhou, Neeraj Chachra, Nader Ebrahimi |
| 2010 | Corpus Callosum Shape Deformation Analysis for Multiple Sclerosis. | |
| 2010 | Structural Differences between Proteins with Similar Sequences. | Qian Cong, Bong-Hyun Kim, Lisa N. Kinch, Nick V. Grishin |
| 2010 | Compressed q-Gram Indexing for Highly Repetitive Biological Sequences. | Francisco Claude, Antonio Faria, Miguel A. Martnez-Prieto, Gonzalo Navarro |
| 2010 | eSBH: An Accurate Constructive Heuristic Algorithm for DNA Sequencing by Hybridization. | Yang Chen, Jinglu Hu |
| 2010 | Tumor Motion Prediction and Tracking in Adaptive Radiotherapy. | Ivan Buzurovic, Tarun Kanti Podder, Ke Huang, Yan Yu |
| 2010 | Modular Software Design for Brachytherapy Image-Guided Robotic Systems. | Ivan Buzurovic, Tarun Kanti Podder, Lei Fu, Yan Yu |
| 2010 | Gene Set Analysis with Covariates. | Ionut Bebu, Franoise Seillier-Moiseiwitsch, Jing Wu, Thomas Mathew |
| 2010 | Fast Phased Small RNA Cycle Counting Algorithms. | Forrest Sheng Bao, Zhixin Xie, Yuanlin Zhang |
| 2010 | Finding Dynamic Modules of Biological Regulatory Networks. | Ferhat Ay, Thang N. Dinh, My T. Thai, Tamer Kahveci |
| 2010 | Use of Hilbert Huang Transform in Uterine Contraction Analysis. | Kemal Aydin, Rustu Murat Demirer, Coskun Bayrak |
| 2010 | Space Efficient Diagonal Linear Space Sequence Alignment. | Gandhi Arpit, Raghavendra Adiga, Kuruvilla Varghese |
| 2010 | An Accurate Prediction Method for Protein Structural Class from Signal Patterns of NMR Spectra in the Absence of Chemical Shift Assignments. | Hiromi Arai, Naoya Tochio, Tsuyoshi Kato, Takanori Kigawa, Masayuki Yamamura |
| 2010 | Comparison of Co-temporal Modeling Algorithms on Sparse Experimental Time Series Data Sets. | Edward E. Allen, James L. Norris, David J. John, Stan J. Thomas, William H. Turkett Jr., Jacquelyn S. Fetrow |
| 2009 | Generating Peptide Sequence Tags for Peptide Identification via Tandem Mass Spectrometry. | Changyong Yu, Guoren Wang, Yuhai Zhao, Keming Mao, Junjie Wu, Wendan Zhai |
| 2009 | Inferring Causal Relations from Multivariate Time Series: A Fast Method for Large-Scale Gene Expression Data. | Yinyin Yuan, Chang-Tsun Li |
| 2009 | Applied GM(0, N) Model in the Study of Influence Factor in Preterm Neonates. | Mei-Li You, Hsiao-Ying Chen, Shu-Peng Liu, Kun-Li Wen |
| 2009 | Learning Scaling Coefficient in Possibilistic Latent Variable Algorithm from Complex Diagnosis Data. | Zong-Xian Yin |
| 2009 | Genetic Algorithm for the Design of Confronting Two-Pair Primers. | Cheng-Hong Yang, Yu-Huei Cheng, Li-Yeh Chuang, Hsueh-Wei Chang |
| 2009 | Tracking the Intracellular Dynamics of Transferrin-labeled QDs in Living Panc-1 Cells. | Gaixia Xu, Junle Qu, Stefan Jger, Qingfeng Song, Su-Shing Chen |
| 2009 | A Practical Edit-Distance Model for RNA Secondary-Structure Comparison. | Chan-Shuo Wu, Guan-Shieng Huang |
| 2009 | A Platform for Identifying MicroRNA Targeting Genes. | Chia-Wei Weng, Chang-Chih Chiang, Chien-Hung Huang, Ka-Lok Ng |
| 2009 | Normalizing Biomedical Name Entities by Similarity-Based Inference Network and De-ambiguity Mining. | Chih-Hsuan Wei, I-Chin Huang, Yi-Yu Hsu, Hung-Yu Kao |
| 2009 | Wedjat: A Mobile Phone Based Medicine In-take Reminder and Monitor. | Mei-Ying Wang, Pei-Hsuan Tsai, Jane W.-S. Liu, John Kar-Kin Zao |