| 2008 | Annotation of metagenome short reads using proxygenes. | Daniel Dalevi, Natalia Ivanova, Konstantinos Mavrommatis, Sean D. Hooper, Ernest Szeto, Philip Hugenholtz, Nikos Kyrpides, Victor M. Markowitz |
| 2008 | Protein structure alignment considering phenotypic plasticity. | Gergely Csaba, Fabian Birzele, Ralf Zimmer |
| 2008 | RNA structure alignment by a unit-vector approach. | Emidio Capriotti, Marc A. Mart-Renom |
| 2008 | Comprehensive | Yana Bromberg, Burkhard Rost |
| 2008 | Optimal spliced alignments of short sequence reads. | Fabio De Bona, Stephan Ossowski, Korbinian Schneeberger, Gunnar Rtsch |
| 2008 | Towards | Sebastian Bcker, Florian Rasche |
| 2008 | A fast and flexible method for the segmentation of aCGH data. | Erez Ben-Yaacov, Yonina C. Eldar |
| 2008 | HapCUT: an efficient and accurate algorithm for the haplotype assembly problem. | Vikas Bansal, Vineet Bafna |
| 2005 | A probabilistic model for mining implicit 'chemical compound-gene' relations from literature. | Shanfeng Zhu, Yasushi Okuno, Gozoh Tsujimoto, Hiroshi Mamitsuka |
| 2005 | Model-P: a basecalling method for resequencing microarrays of diploid samples. | Yiping Zhan, David Kulp |
| 2005 | Prediction of regulatory modules comprising microRNAs and target genes. | Sungroh Yoon, Giovanni De Micheli |
| 2005 | ECCB/JBI 2005 Organization. | |
| 2005 | A fully Bayesian model to cluster gene-expression profiles. | C. Vogl, Ftima Snchez-Cabo, Gernot Stocker, Simon J. Hubbard, Olaf Wolkenhauer, Zlatko Trajanoski |
| 2005 | Reconsidering complete search algorithms for protein backbone NMR assignment. | Olga Vitek, Chris Bailey-Kellogg, Bruce A. Craig, Paul Kuliniewicz, Jan Vitek |
| 2005 | Fast protein classification with multiple networks. | Koji Tsuda, Hyunjung Shin, Bernhard Schlkopf |
| 2005 | Knowledge-based framework for hypothesis formation in biochemical networks. | Tran Hoai Nam, Chitta Baral, Vinay J. Nagaraj, Lokesh Joshi |
| 2005 | Less is more: towards an optimal universal description of protein folds. | Joseph D. Szustakowski, Simon Kasif, Zhiping Weng |
| 2005 | Web servicing the biological office. | Martin Szugat, Daniel Gttler, Katrin Fundel, Florian Sohler, Ralf Zimmer |
| 2005 | Identifying active transcription factors and kinases from expression data using pathway queries. | Florian Sohler, Ralf Zimmer |
| 2005 | Qualitative modelling of regulated metabolic pathways: application to the tryptophan biosynthesis in | E. Simo, Elisabeth Remy, Denis Thieffry, Claudine Chaouiya |
| 2005 | A quadratic programming approach for decomposing steady-state metabolic flux distributions onto elementary modes. | Jean-Marc Schwartz, Minoru Kanehisa |
| 2005 | Fast maximum-likelihood refinement of electron microscopy images. | Sjors H. W. Scheres, Mikel Valle, Jos Mara Carazo |
| 2005 | RNA secondary structural alignment with conditional random fields. | Kengo Sato, Yasubumi Sakakibara |
| 2005 | Adding Some SPICE to DAS. | Andreas Prlic, Thomas A. Down, Tim J. P. Hubbard |
| 2005 | Computational discovery of transcriptional regulatory rules. | Tho Hoan Pham, Jos Carlos Clemente, Kenji Satou, Tu Bao Ho |