| 2002 | Correlating gene promoters and expression in gene disruption experiments. | Kimmo Palin, Esko Ukkonen, Alvis Brazma, Jaak Vilo |
| 2002 | Proteome analysis based on motif statistics. | Pierre Nicodme, T. Doerks, Martin Vingron |
| 2002 | Stochastic pairwise alignments. | Ulrike Mckstein, Ivo L. Hofacker, Peter F. Stadler |
| 2002 | Estonian Genome Project - before the take-off and take-off. | Andres Metspalu |
| 2002 | ECCB 2002 Organization. | Thomas Lengauer |
| 2002 | Editorial. | Thomas Lengauer |
| 2002 | An automatic block and spot indexing with k-nearest neighbors graph for microarray image analysis. | Ho-Youl Jung, Hwan-Gue Cho |
| 2002 | Biological information: making it accessible and integrated (and trying to make sense of it). | Tim J. P. Hubbard |
| 2002 | Breakpoint medians and breakpoint phylogenies: A fixed-parameter approach. | Jens Gramm, Rolf Niedermeier |
| 2002 | Contextual alignment of biological sequences. | Anna Gambin, Slawomir Lasota, Radoslaw Szklarczyk, Jerzy Tiuryn, Jerzy Tyszkiewicz |
| 2002 | A similarity-based method for genome-wide prediction of disease-relevant human genes. | Jan Freudenberg, P. Propping |
| 2002 | Identifying transcription factor binding sites through Markov chain optimization. | Kyle Ellrott, Chuhu Yang, Frances M. Sladek, Tao Jiang |
| 2002 | An efficient and accurate distance based algorithm to reconstruct tandem duplication trees. | Olivier Elemento, Olivier Gascuel |
| 2002 | Detecting genomic features under weak selective pressure: the example of codon usage in animals and plants. | Laurent Duret |
| 2002 | Annotating regulatory DNA based on man-mouse genomic comparison. | Christoph Dieterich, Brian Cusack, Haiyan Wang, Katja Rateitschak, Antje Krause, Martin Vingron |
| 2002 | Feature subset selection for splice site prediction. | Sven Degroeve, Bernard De Baets, Yves Van de Peer, Pierre Rouz |
| 2002 | Using robotics to fold proteins and dock ligands. | Douglas L. Brutlag, Mehmet Serkan Apaydin, Carlos Guestrin, David Hsu, Chris Varma, Amit Pal Singh, Jean-Claude Latombe |
| 2002 | Theoretical analysis of alternative splice forms using computational methods. | Stphanie Bou, Martin Vingron, Evgenia V. Kriventseva, Ina Koch |
| 2002 | Comparative analysis of protein interaction networks. | Peer Bork |
| 2002 | Common intervals and sorting by reversals: a marriage of necessity. | Anne Bergeron, Steffen Heber, Jens Stoye |
| 2002 | A new distance measure for comparing sequence profiles based on path lengths along an entropy surface. | Gary Benson |
| 2002 | Automated annotation of keywords for proteins related to mycoplasmataceae using machine learning techniques. | Ana L. C. Bazzan, Paulo Martins Engel, Luciana F. Schroeder, Srgio C. da Silva |
| 2002 | Modeling splicing sites with pairwise correlations. | Masanori Arita, Koji Tsuda, Kiyoshi Asai |
| 2002 | Stochastic roadmap simulation for the study of ligand-protein interactions. | Mehmet Serkan Apaydin, Carlos Guestrin, Chris Varma, Douglas L. Brutlag, Jean-Claude Latombe |
| 2002 | Comparative genomics of microbial pathogens and symbionts. | Siv G. E. Andersson, Cecilia Alsmark, Bjrn Canbck, Wagied Davids, Carolin Frank, Olof Karlberg, Lisa Klasson, Boris Antoine-Legault, Alex Mira, Ivica Tamas |