| 1994 | Optimally Parsing a Sequence into Different Classes Based on Multiple Types of Evidence. | Gary D. Stormo, David Haussler |
| 1994 | An Expert System for Processing Sequence Homology Data. | Erik L. L. Sonnhammer, Richard Durbin |
| 1994 | The Prediction of Human Exons By Oligonucleotide Composition and Disriminant Analysis of Spliceable Open Reading Frames. | Victor V. Solovyev, Asaf A. Salamov, Charles B. Lawrence |
| 1994 | GeneQuiz: A Workbench for Sequence Analysis. | Michael Scharf, Reinhard Schneider, Georg Casari, Peer Bork, Alfonso Valencia, Christos A. Ouzounis, Chris Sander |
| 1994 | Distributed Machine Learning: Scaling Up with Coarse-grained Parallelism. | Foster J. Provost, Daniel N. Hennessy |
| 1994 | Intelligent DNA-Based Molecular Diagnostics Using Linked Genetic Markers. | Dhiraj K. Pathak, Eric P. Hoffman, Mark W. Perlin |
| 1994 | Geometric Problems in Molecular Biology and Robotics. | David Parsons, John F. Canny |
| 1994 | The Multi-Scale 3D-1D Compatibility Scoring for Inverse Protein Folding Protein. | Kentaro Onizuka, Masayuki Akahoshi, Masato Ishikawa, Kiyoshi Asai |
| 1994 | Flow Cytometry Data Analysis: Comparing Large Multivariate Data Sets Using Classification Trees. | Joseph Norman |
| 1994 | Sequence Comparisons via Algorithmic Mutual Information. | Aleksandar Milosavljevic |
| 1994 | Describing Multiple Levels of Abstraction in the Metabolism. | Michael L. Mavrovouniotis |
| 1994 | Kinematic Manipulation of Molecular Chains Subject to Rigid Constraint. | Dinesh Manocha, Yunshan Zhu |
| 1994 | Predicting Location and Structure Of beta-Sheet Regions Using Stochastic Tree Grammars. | Hiroshi Mamitsuka, Naoki Abe |
| 1994 | High Speed Pattern Matching in Genetic Data Base with Reconfigurable Hardware. | Eric Lemoine, Jol Quinqueton, Jean Sallantin |
| 1994 | Segmentation and Interpretation of 3D Protein Images. | Laurence Leherte, Kim Baxter, Janice I. Glasgow, Suzanne Fortier |
| 1994 | DNA Sequence Analysis Using Hierarchical ART-based Classification Network. | Cathie LeBlanc, Charles R. Katholi, Thomas R. Unnasch, Susan I. Hruska |
| 1994 | Evolution of a Computer Program for Classifying Protein Segments as Transmembrane Domains Using Genetic Programming. | John R. Koza |
| 1994 | Discovering Side-Chain Correlations In alpha-Helices. | Tod M. Klingler, Douglas L. Brutlag |
| 1994 | Toward Unification of Taxonomy Databases in a Distributed Environment. | Hajime Kitakami, Yoshio Tateno, Takashi Gojobori |
| 1994 | Inductive Logic Programming Used to Discover Topological Constraints in Protein Structures. | Ross D. King, Dominic A. Clark, Jack Shirazi, Michael J. E. Sternberg |
| 1994 | An Efficient Method for Multiple Sequence Alignment. | Jin Kim, Sakti Pramanik |
| 1994 | Representations of Metabolic Knowledge: Pathways. | Peter D. Karp, Suzanne M. Paley |
| 1994 | Aligning Genomes with Inversions and Swaps. | James L. Holloway, Paul Cull |
| 1994 | Neural Networks for Determining Protein Specificity and Multiple Alignment of Binding Sites. | John M. Heumann, Alan S. Lapedes, Gary D. Stormo |
| 1994 | Induction of Rules for Biological Macromolecular Crystallization. | Daniel N. Hennessy, Vanathi Gopalakrishnan, Bruce G. Buchanan, John M. Rosenberg, Devika Subramanian |