| 1993 | Pattern Discovery in Gene Regulation: Designing an Analysis Environment. | Stella Veretnik, Bruce R. Schatz |
| 1993 | Protein Structure Prediction System Based on Artificial Neural Networks. | Jukka Vanhala, Kimmo Kaski |
| 1993 | Hidden Markov Models and Iterative Aligners: Study of Their Equivalence and Possibilities. | Hidetoshi Tanaka, Masato Ishikawa, Kiyoshi Asai, Akihiko Konagaya |
| 1993 | Computationally Efficient Cluster Representation in Molecular Sequence Megaclassification. | David J. States, Nomi L. Harris, Lawrence Hunter |
| 1993 | A Service-Oriented Information Sources Database for the Biological Sciences. | Gordon K. Springer, Timothy B. Patrick |
| 1993 | Identification of Human Gene Functional Regions Based on Oligonucleotide Composition. | Victor V. Solovyev, Charles B. Lawrence |
| 1993 | A Partial Digest Approach to Restriction Site Mapping. | Steven Skiena, Gopalakrishnan Sundaram |
| 1993 | Testing HIV Molecular Biology In itIn Silico Physiologies. | Hans B. Sieburg, Cristobal Baray, Kevin S. Kunzelman |
| 1993 | Building Large Knowledge Bases in Molecular Biology. | Olivier Schmeltzer, Claudine Mdigue, P. Uvietta, Franois Rechenmann, Frank Dorkeld, Guy Perrire, Christian Gautier |
| 1993 | Minimizing Complexity in Cellular Automata Models of Self-Replication. | James A. Reggia, Hui-Hsien Chou, Steven L. Armentrout, Yun Peng |
| 1993 | Petri Net Representations in Metabolic Pathways. | Venkatramana N. Reddy, Michael L. Mavrovouniotis, Michael N. Liebman |
| 1993 | Object-Oriented Knowledge Bases for the Analysis of Prokaryotic and Eukaryotic Genomes. | Guy Perrire, Frank Dorkeld, Franois Rechenmann, Christian Gautier |
| 1993 | Genetic Algorithms for DNA Sequence Assembly. | Rebecca J. Parsons, Stephanie Forrest, Christian Burks |
| 1993 | A Multi-Level Description Scheme of Protein Conformation. | Kentaro Onizuka, Stephen T. C. Wong, Masato Ishikawa, Kiyoshi Asai |
| 1993 | Prediction of Primate Splice Junction Gene Sequences with a Cooperative Knowledge Acquisition System. | Engelbert Mephu Nguifo, Jean Sallantin |
| 1993 | Discovering Sequence Similarity by the Algorithmic Significance Method. | Aleksandar Milosavljevic |
| 1993 | Identification of Localized and Distributed Bottlenecks in Metabolic Pathways. | Michael L. Mavrovouniotis |
| 1993 | Constructing a Distributed Object-Oriented System with Logical Constraints for Fluorescence-Activated Cell Sorting. | Toshiyuki Matsushima |
| 1993 | MultiMap: An Expert System for Automated Genetic Linkage Mapping. | Tara Cox Matise, Mark Perlin, Aravinda Chakravarti |
| 1993 | Protein Secondary Structure Prediction Using Two-Level Case-Based Reasoning. | Bing Leng, Bruce G. Buchanan, Hugh B. Nicholas |
| 1993 | A Small Automaton for Word Recognition in DNA Sequences. | Christophe Lefvre, Joh-E Ikeda |
| 1993 | Design of an Object-Oriented Database for Reverse Genetics. | Krys J. Kochut, Jonathan P. Arnold, John A. Miller, Walter D. Potter |
| 1993 | Detection of Correlations in tRNA Sequences with Structural Implications. | Tod M. Klingler, Douglas L. Brutlag |
| 1993 | Protein Sequencing Experiment Planning Using Analogy. | Brian P. Kettler, Lindley Darden |
| 1993 | Representations of Metabolic Knowledge. | Peter D. Karp, Monica Riley |