| 2012 | A new Kernel non-negative matrix factorization and its application in microarray data analysis. | Yifeng Li, Alioune Ngom |
| 2012 | idock: A multithreaded virtual screening tool for flexible ligand docking. | Hongjian Li, Kwong-Sak Leung, Man Hon Wong |
| 2012 | Blind identification of post-translational modifications via dynamic time warping model. | Hui Li, Chunmei Liu, William M. Southerland |
| 2012 | Collaboration visualization on large dataset for protein-protein interaction network. | Hui Li, Chunmei Liu, Xumin Liu |
| 2012 | Exhaustive RT-RICO algorithm for mining association rules in protein secondary structure. | Leong Lee, Jennifer L. Leopold, Ronald L. Frank |
| 2012 | Protein secondary structure prediction using BLAST and exhaustive RT-RICO, the search for optimal segment length and threshold. | Leong Lee, Jennifer L. Leopold, Ronald L. Frank |
| 2012 | Learning relationships between over-represented motifs in a set of DNA sequences. | Oksana Korol, Marcel Turcotte |
| 2012 | SMISB: A system for Managing Minimum Information from omics' studies in systems biology. | Kyung Dae Ko, Chunmei Liu, Amen Ra Mashariki, Legand Burge |
| 2012 | Non-coding RNA gene finding with combined partial covariance models. | Wenbo Jiang, Kay C. Wiese |
| 2012 | Data mining techniques for AFM- based tumor classification. | Stephan Hutterer, Gerald Zauner, Marlene Huml, Rene Silye, Kurt Schilcher |
| 2012 | Developing a novel integrated model of p38 MAPK and glucocorticoid signalling pathways. | Alex Holehouse, Xian Yang, Ian M. Adcock, Yike Guo |
| 2012 | Towards predictive structure-based models of evolved drug resistance. | David Hecht, Gary B. Fogel |
| 2012 | Detecting aberrant signal transduction pathways from high-throughput data using GIST algorithm. | Jinghua Gu, Jianhua Xuan, Chen Wang, Li Chen, Tian-Li Wang, Ie-Ming Shih |
| 2012 | Robust integrated framework for effective feature selection and sample classification and its application to gene expression data analysis. | Shang Gao, Omar Addam, Ala Qabaja, Abdallah M. ElSheikh, Omar Zarour, Mohamad Nagi, Flouris Triant, Wadhah Almansoori, Omer Sair, Tansel zyer, Jia Zeng, Jon G. Rokne, Reda Alhajj |
| 2012 | An ontology design methodology for Knowledge-Based systems with application to bioinformatics. | Antonino Fiannaca, Massimo La Rosa, Salvatore Gaglio |
| 2012 | Molecular distance geometry optimization using geometric build-up and evolutionary techniques on GPU. | Levente Fabry-Asztalos, Istvn Lorentz, Razvan Andonie |
| 2012 | Biological pathway completion using network motifs and random walks on graphs. | Maya El Dayeh, Michael Hahsler |
| 2012 | Introduction of R-LCS and comparative analysis with FSC and Mahalanobis-Taguchi method for Breast Cancer classification. | Benjamin Daniels, Steven M. Corns, Elizabeth A. Cudney |
| 2012 | Automated plant identification using artificial neural networks. | Jonathan Y. Clark, David P. A. Corney, Hongying Lilian Tang |
| 2012 | Protein model assessment using extented fuzzy decision tree with spatial neighborhood features. | Anjum Chida, Robert W. Harrison, Yan-Qing Zhang |
| 2012 | An integrative bioinformatics approach for identifying subtypes and subtype-specific drivers in cancer. | Peikai Chen, Y. S. Hung, Yubo Fan, Stephen T. C. Wong |
| 2012 | Bcl∷ChemInfo - Qualitative analysis of machine learning models for activation of HSD involved in Alzheimer's Disease. | Mariusz Butkiewicz, Edward W. Lowe, Jens Meiler |
| 2012 | Multiple worlds model for motif discovery. | Joseph Alexander Brown |
| 2012 | Large-scale computation of pediatric growth percentiles with fuzzy logic justification of parameter selection. | Chengpeng Bi, J. Steven Leeder |
| 2012 | On the performance of particle swarm optimization for parameterizing kinetic models of cellular networks. | Natalie Berestovsky, Riya Fukui, Luay Nakhleh |