| 2002 | On Template Method for DNA Sequence Design. | Satoshi Kobayashi, Tomohiro Kondo, Masanori Arita |
| 2002 | NACST/Seq: A Sequence Design System with Multiobjective Optimization. | Dongmin Kim, Soo-Yong Shin, In-Hee Lee, Byoung-Tak Zhang |
| 2002 | Hierarchical DNA Memory Based on Nested PCR. | Satoshi Kashiwamura, Masahito Yamamoto, Atsushi Kameda, Toshikazu Shiba, Azuma Ohuchi |
| 2002 | Unexpected Universality Results for Three Classes of P Systems with Symport/Antiport. | Mihai Ionescu, Carlos Martn-Vide, Andrei Paun, Gheorghe Paun |
| 2002 | Implementation of a Random Walk Method for Solving 3-SAT on Circular DNA Molecules. | Hubert Hug, Rainer Schuler |
| 2002 | From RNA Secondary Structure to Coding Theory: A Combinatorial Approach. | Christine E. Heitsch, Anne Condon, Holger H. Hoos |
| 2002 | Splicing Systems: Regularity and Below. | Tom Head, Dennis Pixton, Elizabeth Goode |
| 2002 | Conformons-P Systems. | Pierluigi Frisco, Sungchul Ji |
| 2002 | A Software Tool for Generating Non-crosshybridizing Libraries of DNA Oligonucleotides. | Russell J. Deaton, Junghuei Chen, Hong Bi, John A. Rose |
| 2002 | A PCR-based Protocol for In Vitro Selection of Non-crosshybridizing Oligonucleotides. | Russell J. Deaton, Junghuei Chen, Hong Bi, Max H. Garzon, Harvey Rubin, David Harlan Wood |
| 2002 | Parallel Rewriting P Systems with Deadlock. | Daniela Besozzi, Claudio Ferretti, Giancarlo Mauri, Claudio Zandron |
| 2002 | Engineering Signal Processing in Cells: Towards Molecular Concentration Band Detection. | Subhayu Basu, David K. Karig, Ron Weiss |
| 2002 | Binary Arithmetic for DNA Computers. | Rana Barua, Janardan Misra |
| 2002 | Algorithms for Testing That Sets of DNA Words Concatenate without Secondary Structure. | Mirela Andronescu, Danielle Dees, Laura Slaybaugh, Yinglei Zhao, Anne Condon, Barry Cohen, Steven Skiena |
| 2001 | A Proposal of DNA Computing on Beads with Application to SAT Problems. | Yoichi Takenaka, Akihiro Hashimoto |
| 2001 | Solutions of Shortest Path Problems by Concentration Control. | Masahito Yamamoto, Nobuo Matsuura, Toshikazu Shiba, Yumi Kawazoe, Azuma Ohuchi |
| 2001 | Another Realization of Aqueous Computing with Peptide Nucleic Acid. | Masayuki Yamamoto, Yusuke Hiroto, Taku Motoba |
| 2001 | DNA Starts to Learn Poker. | David Harlan Wood, Hong Bi, Steven Orla Kimbrough, Dong-Jun Wu, Junghuei Chen |
| 2001 | A Realization of Information Gate by Using Enterococcus faecalis Pheromone System. | Kenichi Wakabayashi, Masayuki Yamamura |
| 2001 | Horn Clause Computation by Self-assembly of DNA Molecules. | Hiroki Uejima, Masami Hagiya, Satoshi Kobayashi |
| 2001 | Developing Support System for Sequence Design in DNA Computing. | Fumiaki Tanaka, Masashi Nakatsugawa, Masahito Yamamoto, Toshikazu Shiba, Azuma Ohuchi |
| 2001 | Operation of a Purified DNA Nanoactuator. | Friedrich C. Simmel, Bernard Yurke |
| 2001 | Population Computation and Majority Inference in Test Tube. | Yasubumi Sakakibara |
| 2001 | PUNCH: An Evolutionary Algorithm for Optimizing Bit Set Selection. | Adam J. Ruben, Stephen J. Freeland, Laura F. Landweber |
| 2001 | The Fidelity of the Tag-Antitag System. | John A. Rose, Russell J. Deaton, Masami Hagiya, Akira Suyama |