| 2017 | A General-Purpose CRN-to-DSD Compiler with Formal Verification, Optimization, and Simulation Capabilities. | Stefan Badelt, Seung Woo Shin, Robert F. Johnson, Qing Dong, Chris Thachuk, Erik Winfree |
| 2017 | A Stochastic Approach to Shortcut Bridging in Programmable Matter. | Marta Andrs Arroyo, Sarah Cannon, Joshua J. Daymude, Dana Randall, Andra W. Richa |
| 2017 | Robust Detection in Leak-Prone Population Protocols. | Dan Alistarh, Bartlomiej Dudek, Adrian Kosowski, David Soloveichik, Przemyslaw Uznanski |
| 2016 | Time Complexity of Computation and Construction in the Chemical Reaction Network-Controlled Tile Assembly Model. | Nicholas Schiefer, Erik Winfree |
| 2016 | Resiliency to Multiple Nucleation in Temperature-1 Self-Assembly. | Matthew J. Patitz, Trent A. Rogers, Robert T. Schweller, Scott M. Summers, Andrew Winslow |
| 2016 | A Coarse-Grained Model of DNA Nanotube Population Growth. | Vahid Mardanlou, Leopold N. Green, Hari K. K. Subramanian, Rizal F. Hariadi, Jongmin Kim, Elisa Franco |
| 2016 | Verifying Chemical Reaction Network Implementations: A Bisimulation Approach. | Robert F. Johnson, Qing Dong, Erik Winfree |
| 2016 | Hierarchical Self-Assembly of Fractals with Signal-Passing Tiles - (Extended Abstract). | Jacob Hendricks, Meagan Olsen, Matthew J. Patitz, Trent A. Rogers, Hadley Thomas |
| 2016 | Nondeterministic Seedless Oritatami Systems and Hardness of Testing Their Equivalence. | Yo-Sub Han, Hwee Kim, Makoto Ota, Shinnosuke Seki |
| 2016 | A Scheme for Molecular Computation of Maximum Likelihood Estimators for Log-Linear Models. | Manoj Gopalkrishnan |
| 2016 | On the Runtime of Universal Coating for Programmable Matter. | Zahra Derakhshandeh, Robert Gmyr, Alexandra M. Porter, Andra W. Richa, Christian Scheideler, Thim Strothmann |
| 2016 | Chemical Reaction Network Designs for Asynchronous Logic Circuits. | Luca Cardelli, Marta Kwiatkowska, Max Whitby |
| 2016 | Programming Discrete Distributions with Chemical Reaction Networks. | Luca Cardelli, Marta Kwiatkowska, Luca Laurenti |
| 2016 | Robustness of Expressivity in Chemical Reaction Networks. | Robert Brijder, David Doty, David Soloveichik |
| 2015 | Leakless DNA Strand Displacement Systems. | Chris Thachuk, Erik Winfree, David Soloveichik |
| 2015 | Universal Computation and Optimal Construction in the Chemical Reaction Network-Controlled Tile Assembly Model. | Nicholas Schiefer, Erik Winfree |
| 2015 | Stochastic Simulation of the Kinetics of Multiple Interacting Nucleic Acid Strands. | Joseph Malcolm Schaeffer, Chris Thachuk, Erik Winfree |
| 2015 | On Low Energy Barrier Folding Pathways for Nucleic Acid Sequences. | Leigh-Anne Mathieson, Anne Condon |
| 2015 | Supervised Learning in an Adaptive DNA Strand Displacement Circuit. | Matthew R. Lakin, Darko Stefanovic |
| 2015 | Reflections on Tiles (in Self-Assembly). | Jacob Hendricks, Matthew J. Patitz, Trent A. Rogers |
| 2015 | Optimal Program-Size Complexity for Self-Assembly at Temperature 1 in 3D. | David Furcy, Samuel Micka, Scott M. Summers |
| 2015 | Leader Election and Shape Formation with Self-organizing Programmable Matter. | Zahra Derakhshandeh, Robert Gmyr, Thim Strothmann, Rida A. Bazzi, Andra W. Richa, Christian Scheideler |
| 2015 | New Geometric Algorithms for Fully Connected Staged Self-Assembly. | Erik D. Demaine, Sndor P. Fekete, Christian Scheffer, Arne Schmidt |
| 2015 | Synthesizing and Tuning Chemical Reaction Networks with Specified Behaviours. | Neil Dalchau, Niall Murphy, Rasmus L. Petersen, Boyan Yordanov |
| 2015 | Flipping Tiles: Concentration Independent Coin Flips in Tile Self-Assembly. | Cameron T. Chalk, Bin Fu, Alejandro Huerta, Mario A. Maldonado, Eric Martinez, Robert T. Schweller, Tim Wylie |