| 2010 | Support vectors based correlation coefficient for gene and sample selection in cancer classification. | Piyushkumar A. Mundra, Jagath C. Rajapakse |
| 2010 | Integrating multiple scoring functions to improve protein loop structure conformation space sampling. | Yaohang Li, Ionel Rata, Eric Jakobsson |
| 2010 | Modeling treatment and drug effects at the molecular level using hybrid system theory. | Xiangfang Li, Lijun Qian, Edward R. Dougherty |
| 2010 | Missing value imputation methods for gene-sample-time microarray data analysis. | Yifeng Li, Alioune Ngom, Luis Rueda |
| 2010 | Principal components analysis filters functionally significant peroxidase motions. | Monique Laberge, Istvan Kovesi |
| 2010 | Sequence transformation to a complex signature form for consistent phylogenetic tree using Extensible Markov Model. | Rao M. Kotamarti, Michael Hahsler, Douglas W. Raiford, Margaret H. Dunham |
| 2010 | Classification of HIV-1 protease crystal structures using Random Forest, linear discriminant analysis and logistic regression. | Gene M. Ko, A. Srinivas Reddy, Sunil Kumar, Srinivas A. Bailey, Rajni Garg |
| 2010 | Issues with the PipeAlign phylogenomics toolkit in identifying protein subfamilies. | Christine Kehyayan, Gregory Butler |
| 2010 | A fitness-independent evolvability measure for evolutionary developmental systems. | Yaochu Jin, Jens Trommler |
| 2010 | Identification of a gene expression core signature for Duchenne muscular dystrophy (DMD) via integrative analysis reveals novel potential compounds for treatment. | Noru Ichim-Moreno, Manuel Aranda, Christian R. Voolstra |
| 2010 | Machine learning approaches for customized docking scores: Modeling of inhibition of Mycobacterium tuberculosis enoyl acyl carrier protein reductase. | Gary B. Fogel, Jonathan Tran, Stephen Johnson, David Hecht |
| 2010 | Functional data classification for temporal gene expression data with kernel-induced random forests. | Guangzhe Fan, Jiguo Cao, Jiheng Wang |
| 2010 | An exploration of individual RNA structural elements in RNA gene finding. | Nicholas George Erho, Kay C. Wiese |
| 2010 | Additive noise analysis on microarray data via SVM classification. | Zejin Jason Ding, Yan-Qing Zhang |
| 2010 | Neural grammar networks for toxicology. | Christopher J. F. Cameron, Eddie Y. T. Ma, Timothy C. Kremer |
| 2010 | Side effect machines for quaternary edit metric decoding. | Joseph A. Brown, Sheridan K. Houghten, Daniel A. Ashlock |
| 2010 | Mixing patterns in a global influenza a virus network using whole genome comparisons. | Adrienne Breland, Mehmet Hadi Gnes, Karen Schlauch, Frederick C. Harris Jr. |
| 2010 | Using decision trees to study the convergence of phylogenetic analyses. | Grant R. Brammer, Tiffani L. Williams |
| 2010 | Supervised learning of maternal cigarette-smoking signatures from placental gene expression data: A case study. | Chengpeng Bi, Carrie A. Vyhlidal, J. Steven Leeder |
| 2010 | Searching for a single mathematical function to address the nonlinear retention time shifts problem in nanoLC-MS data: A fuzzy-evolutionary computational proteomics approach. | Alan J. Barton |
| 2010 | Applying neural networks to classify influenza virus antigenic types and hosts. | Pavan Kumar Attaluri, Zhengxin Chen, Guoqing Lu |
| 2010 | Nearest neighbor training of side effect machines for sequence classification. | Daniel A. Ashlock, Andrew McEachern |
| 2010 | Detecting retroviruses using reading frame information and side effect machines. | Wendy Ashlock, Suprakash Datta |
| 2010 | Exploring structural modeling of proteins for kernel-based enzyme discrimination. | Marco A. Alvarez, Changhui Yan |
| 2010 | Identifying essential features for the classification of real and pseudo microRNAs precursors using fuzzy decision trees. | Na'el Abu-Halaweh, Robert W. Harrison |