| 2020 | Evolutionary Context-Integrated Deep Sequence Modeling for Protein Engineering. | Yunan Luo, Lam Vo, Hantian Ding, Yufeng Su, Yang Liu, Wesley Wei Qian, Huimin Zhao, Jian Peng |
| 2020 | MONN: A Multi-objective Neural Network for Predicting Pairwise Non-covalent Interactions and Binding Affinities Between Compounds and Proteins. | Shuya Li, Fangping Wan, Hantao Shu, Tao Jiang, Dan Zhao, Jianyang Zeng |
| 2020 | Polynomial-Time Statistical Estimation of Species Trees Under Gene Duplication and Loss. | Brandon Legried, Erin K. Molloy, Tandy J. Warnow, Sbastien Roch |
| 2020 | Identifying Causal Variants by Fine Mapping Across Multiple Studies. | Nathan LaPierre, Kodi Taraszka, Helen Huang, Rosemary He, Farhad Hormozdiari, Eleazar Eskin |
| 2020 | Efficient and Accurate Inference of Microbial Trajectories from Longitudinal Count Data. | Tyler A. Joseph, Amey P. Pasarkar, Itsik Pe'er |
| 2020 | A Scalable Method for Estimating the Regional Polygenicity of Complex Traits. | Ruth Johnson, Kathryn S. Burch, Kangcheng Hou, Mario Paciuc, Bogdan Pasaniuc, Sriram Sankararaman |
| 2020 | AStarix: Fast and Optimal Sequence-to-Graph Alignment. | Pesho Ivanov, Benjamin Bichsel, Harun Mustafa, Andr Kahles, Gunnar Rtsch, Martin T. Vechev |
| 2020 | A Guided Network Propagation Approach to Identify Disease Genes that Combines Prior and New Information. | Borislav H. Hristov, Bernard Chazelle, Mona Singh |
| 2020 | Bagging MSA Learning: Enhancing Low-Quality PSSM with Deep Learning for Accurate Protein Structure Property Prediction. | Yuzhi Guo, Jiaxiang Wu, Hehuan Ma, Sheng Wang, Junzhou Huang |
| 2020 | Supervised Adversarial Alignment of Single-Cell RNA-seq Data. | Songwei Ge, Haohan Wang, Amir Alavi, Eric P. Xing, Ziv Bar-Joseph |
| 2020 | Iterative Refinement of Cellular Identity from Single-Cell Data Using Online Learning. | Chao Gao, Joshua D. Welch |
| 2020 | Multiple Competition-Based FDR Control and Its Application to Peptide Detection. | Kristen Emery, Syamand Hasam, William Stafford Noble, Uri Keich |
| 2020 | A Randomized Parallel Algorithm for Efficiently Finding Near-Optimal Universal Hitting Sets. | Baris Ekim, Bonnie Berger, Yaron Orenstein |
| 2020 | Deep Large-Scale Multi-task Learning Network for Gene Expression Inference. | Kamran Ghasedi Dizaji, Wei Chen, Heng Huang |
| 2020 | Privacy-Preserving Biomedical Database Queries with Optimal Privacy-Utility Trade-Offs. | Hyunghoon Cho, Sean Simmons, Ryan Kim, Bonnie Berger |
| 2020 | Potpourri: An Epistasis Test Prioritization Algorithm via Diverse SNP Selection. | Gizem Caylak, A. Ercment iek |
| 2020 | Estimating the Rate of Cell Type Degeneration from Epigenetic Sequencing of Cell-Free DNA. | Christa Caggiano, Barbara Celona, Fleur Garton, Joel Mefford, Brian Black, Catherine Lomen-Hoerth, Andrew Dahl, Noah Zaitlen |
| 2020 | PWAS: Proteome-Wide Association Study. | Nadav Brandes, Nathan Linial, Michal Linial |
| 2020 | CluStrat: A Structure Informed Clustering Strategy for Population Stratification. | Aritra Bose, Myson C. Burch, Agniva Chowdhury, Peristera Paschou, Petros Drineas |
| 2020 | PaccMann | Jannis Born, Matteo Manica, Ali Oskooei, Joris Cadow, Mara Rodrguez Martnez |
| 2020 | Bayesian Non-parametric Clustering of Single-Cell Mutation Profiles. | Nico Borgsmller, Jos Bonet, Francesco Marass, Abel Gonzlez-Prez, Nria Lpez-Bigas, Niko Beerenwinkel |
| 2020 | Computing the Rearrangement Distance of Natural Genomes. | Leonard Bohnenkmper, Marlia D. V. Braga, Daniel Doerr, Jens Stoye |
| 2020 | MosaicFlye: Resolving Long Mosaic Repeats Using Long Reads. | Anton Bankevich, Pavel A. Pevzner |
| 2020 | Spectral Jaccard Similarity: A New Approach to Estimating Pairwise Sequence Alignments. | Tavor Z. Baharav, Govinda M. Kamath, David N. C. Tse, Ilan Shomorony |
| 2020 | Strain-Aware Assembly of Genomes from Mixed Samples Using Flow Variation Graphs. | Jasmijn A. Baaijens, Leen Stougie, Alexander Schnhuth |