| 2017 | Longitudinal Genotype-Phenotype Association Study via Temporal Structure Auto-learning Predictive Model. | Xiaoqian Wang, Jingwen Yan, Xiaohui Yao, Sungeun Kim, Kwangsik Nho, Shannon L. Risacher, Andrew J. Saykin, Li Shen, Heng Huang |
| 2017 | NetREX: Network Rewiring Using EXpression - Towards Context Specific Regulatory Networks. | Yijie Wang, Dong-Yeon Cho, Hangnoh Lee, Brian Oliver, Teresa M. Przytycka |
| 2017 | Enhancing Searches for Optimal Trees Using SIESTA. | Pranjal Vachaspati, Tandy J. Warnow |
| 2017 | AllSome Sequence Bloom Trees. | Chen Sun, Robert S. Harris, Rayan Chikhi, Paul Medvedev |
| 2017 | Improved Search of Large Transcriptomic Sequencing Databases Using Split Sequence Bloom Trees. | Brad Solomon, Carl Kingsford |
| 2017 | Reconstructing Antibody Repertoires from Error-Prone Immunosequencing Datasets. | Alexander Shlemov, Sergey Bankevich, Andrey V. Bzikadze, Yana Safonova, Pavel A. Pevzner |
| 2017 | Species Tree Estimation Using ASTRAL: How Many Genes Are Enough? | Shubhanshu Shekhar, Sebastien Roch, Siavash Mirarab |
| 2017 | Using Stochastic Approximation Techniques to Efficiently Construct Confidence Intervals for Heritability. | Regev Schweiger, Eyal Fisher, Elior Rahmani, Liat Shenhav, Saharon Rosset, Eran Halperin |
| 2017 | Finding Teams in Graphs and Its Application to Spatial Gene Cluster Discovery. | Tizian Schulz, Jens Stoye, Daniel Doerr |
| 2017 | Algorithms for Computing the Family-Free Genomic Similarity Under DCJ. | Diego P. Rubert, Gabriela Medeiros, Edna Ayako Hoshino, Marlia D. V. Braga, Jens Stoye, Fbio Viduani Martinez |
| 2017 | Towards Recovering Allele-Specific Cancer Genome Graphs. | Ashok Rajaraman, Jian Ma |
| 2017 | A Bayesian Framework for Estimating Cell Type Composition from DNA Methylation Without the Need for Methylation Reference. | Elior Rahmani, Regev Schweiger, Liat Shenhav, Eleazar Eskin, Eran Halperin |
| 2017 | Rearrangement Scenarios Guided by Chromatin Structure. | Sylvain Pulicani, Pijus Simonaitis, Eric Rivals, Krister M. Swenson |
| 2017 | GATTACA: Lightweight Metagenomic Binning Using Kmer Counting. | Victoria Popic, Volodymyr Kuleshov, Michael P. Snyder, Serafim Batzoglou |
| 2017 | EPR-Dictionaries: A Practical and Fast Data Structure for Constant Time Searches in Unidirectional and Bidirectional FM Indices. | Christopher Pockrandt, Marcel Ehrhardt, Knut Reinert |
| 2017 | Superbubbles, Ultrabubbles and Cacti. | Benedict Paten, Adam M. Novak, Erik Garrison, Glenn Hickey |
| 2017 | New Algorithms for the Genomic Duplication Problem. | Jaroslaw Paszek, Pawel Grecki |
| 2017 | Joker de Bruijn: Sequence Libraries to Cover All k-mers Using Joker Characters. | Yaron Orenstein, Ryan Kim, Polly Fordyce, Bonnie Berger |
| 2017 | BBK | Adegoke A. Ojewole, Jonathan D. Jou, Vance G. Fowler, Bruce Randall Donald |
| 2017 | Statistical Consistency of Coalescent-Based Species Tree Methods Under Models of Missing Data. | Michael Nute, Jed Chou |
| 2017 | A Bayesian Active Learning Experimental Design for Inferring Signaling Networks. | Robert Osazuwa Ness, Karen Sachs, Parag Mallick, Olga Vitek |
| 2017 | Ultra-Fast Identity by Descent Detection in Biobank-Scale Cohorts Using Positional Burrows-Wheeler Transform. | Ardalan Naseri, Xiaoming Liu, Shaojie Zhang, Degui Zhi |
| 2017 | Epistasis in Genomic and Survival Data of Cancer Patients. | Dariusz Matlak, Ewa Szczurek |
| 2017 | TreeShrink: Efficient Detection of Outlier Tree Leaves. | Uyen Mai, Siavash Mirarab |
| 2017 | A Network Integration Approach for Drug-Target Interaction Prediction and Computational Drug Repositioning from Heterogeneous Information. | Yunan Luo, Xinbin Zhao, Jingtian Zhou, Jinling Yang, Yanqing Zhang, Wenhua Kuang, Jian Peng, Ligong Chen, Jianyang Zeng |